Biogenesis 6×22: Who had the audacity for such invention?

Say what now?

Disclaimer: I am in love with Chris Carter. I am in love with The X-Files. I would sooner lose a finger, in fact, let’s make it my thumb, than I would have missed out on watching this series – the whole series – all of it – including the nauseating moments. So please understand that when I complain, and I will complain, I complain with love. Kapish?

Good, because my complaints start right at the beginning. I am so sick of these self-important, perfunctory mytharc opening monologues I’m about ready to curse. And I don’t curse!! I get the idea. I know. This is epic. Epic, epic, epic. All of life is about to be explained. All of life is at stake. J’nough. Let’s move on.

Now, on the more diplomatic side of things, at least we know right out of the gate that the turn The X-Files is taking is grander and more fundamental than any conspiracy created by men merely to hide information. This is the mythology’s new beginning. The Syndicate is dead, the slate has been wiped clean, almost any plot is possible and this is the plot they choose: Aliens as God. The implications are… bottomless. And they’re making my brain hurt.

In its defense, this plot is only overtly going where The X-Files has already gone before. Mulder’s mission to prove the existence of alien life, his quest to find absolute truth, it’s all analogous to a man’s, and mankind’s, search for God. I get that. It’s subtle. It’s good. Sometimes it’s not so subtle. But it’s still good. It’s like a biblical parable; all the more effective for concealing the truth inside a fiction.

But in this bit of fiction, an alien spaceship has supposedly popped up, plain as day on the coast of a well-populated continent, yet no governments take notice. No spy satellites, no missiles are aimed in its direction. No soldiers are sent out to guard it or to confiscate it. Instead, a bunch of independent science nerds have free access to it without having to answer to anyone. The news of this discovery never leaks to the vigilant folks at MUFON. The media never takes notice.

Rubbish. Rubbish, I tell you.

To be honest, the very idea causes my eyes to roll so far into the back of my head they disappear. It took me a while to convince them to come back. So if you’ll excuse me, I’m going to ignore the mythology aspect of this mythology episode for most of this review.

On to our heroes… Scully is trying to convince Mulder that their job at the F.B.I. is done. After all, they’ve won, haven’t they? The conspiracy is kaput. Never mind that earth is still on the verge of being invaded and humanity is still scheduled to be destroyed, someone else can see to those details. Why can’t she and Mulder move on? Ah, but Scully has forgotten about the most important thing of all, the quest that predates Mulder’s mission to take down the Syndicate’s conspiracy: the search for Samantha. But who can blame her? I’d pretty much forgotten myself and I’m probably not the only one. Which is why this moment is not so covertly placed here, I suspect. Chris Carter needed to remind the audience that there’s a reason Mulder and Scully are still on the X-Files and therefore there’s a reason we’re still watching this show. Some truths have yet to be uncovered.

Meanwhile, some truths are never fully uncovered. Enter Diana Fowley.

We’ll get to more of the eternal mysteries surrounding her character come Season 7, but for now it’s enough just to figure out why, for the love of all that is watchable, Chris Carter felt it necessary to have her strip down in Mulder’s apartment and force us to watch. Since, logically, we can’t really expect that she was about to seduce a man barely well enough to hold a brief conversation, we can only assume that it was meant to get a rise out of the audience. And it certainly got a rise out of this audience. I remember rising to my feet in righteous indignation. (Chris Carter, don’t you make me come out there.)

Wait. Back up. What was she doing in Mulder’s apartment in the first place?

According to what Fowley says both to Cigarette-Smoking Man over the phone and Scully in person, Mulder called her after he collapsed in the stairwell. Not that I take as gospel a single word she tells Scully, I’m inclined to think that she has no reason to be dishonest with CSM. The puzzle then is why would Mulder call her? Well, he’s already figured out he can’t trust Skinner. Scully’s off hunting Dr. Sandoz. I’d give him the excuse of being out of friends, but where the Lone Gunmen unavailable?

Whatever. He calls her. If trusting her even after she miraculously survives the events of “One Son” (6×12) isn’t proof he’s earned the padded cell he’s finally given this episode, I don’t know what is. Or perhaps he has doubts we don’t get to see?

Now, please bear with me here because I’m about to force you to scroll. Below is a scene from the script of “Biogenesis” that was cut. (Darn those brief 43 minutes). And while I’ll cry along with the purists that since it didn’t air, it’s not canon, I think it helps illuminate some plot points that otherwise remain murky. I’ll go more into detail on my case for its inclusion afterward.

{Editor’s Note: I don’t make this stuff up. You can find my sources here: (Click on Season 6 episodes and scroll down to Biogenesis. This is the version I recommend.) And here: And here:}

A faint clatter from another room gets her attention. She turns to see… Mulder exiting the kitchen past her. He is pale, dazed, disheveled – markedly worse than when we last saw him. He shuffles into the living room, seemingly oblivious to her presence. Fowley watches him pass, shaken by his strung-out appearance.
FOWLEY: Fox..? Are you alright?
Mulder shuffles to the living room window, peers out through the closed blinds. He doesn’t look at her. Silence for a long, uncomfortable beat.
MULDER: Where did you go?
FOWLEY: You were asleep, and I…
She trails off, shrugs. Mulder is still staring out the window. Now, he finally looks to her – pins her with a look, actually.
MULDER: Where did you GO?!
FOWLEY: I… I went home. (Off his silence) Maybe I shouldn’t have.
MULDER: Were you alone?
Fowley eyes him, taken aback by the question.
MULDER: Were you by yourself?
FOWLEY: Yes. Of course. What kind of question is that?
We creep in on him as once again we hear strange AUDIO HITS – the disjointed clamor of voices in his head. We recognize FOWLEY’S VOICE rising from the din. We make out words, fragments of phrases: “it’s starting…”, “the artifact…”, he doesn’t suspect…”
Mulder struggles to clear his head.
MULDER: You were talking. Who were you talking to?
By all outward signs, Fowley is puzzled by the question.
FOWLEY: To you. I’m talking to you.
Mulder presses his hand to his temple. The cacophony in his head grows louder. More snippets from Fowley: “not possible…”, “gain his trust…”, “I just left him…”
MULDER: You’re lying.
FOWLEY: I’m lying? (beat) What am I lying about?
Mulder says nothing. Wary, he watches as Fowley moves closer.
FOWLEY: Fox, you’re not well. I think I need to take you to a doctor.
MULDER: I’m not going anywhere with you.
FOWLEY: Fox, please…
She reaches for him. Increasingly paranoid, Mulder pulls away. Another quick AUDIO HIT: the voices rise in a muffled, incomprehensible crescendo.
MULDER: No. Uh-uh. First Skinner and now you. You’ve betrayed me. (louder) You’re here to spy on me aren’t you? AREN’T YOU?!
In a sudden frenzy, Mulder SWIPES everything off the top of his desk, hurling it across the room. Unnerved, Fowley takes a step back. Mulder upends the coffee table, sending books and papers flying.
FOWLEY: Fox, calm down –
Breathing faster now, Mulder turns on Fowley, approaches – angry eyes fixed on her.
MULDER: Tell me the truth…
Nervous, Fowley discreetly unbuttons her jacket. We catch a glimpse of her pistol tucked in its holster.
FOWLEY: You’re not making sense. You need help. (backing off) Please — calm down.
Mulder doesn’t. He keeps advancing.
A LOUD ELECTRIC SNAP. Mulder winces. His legs give out.
He collapses to the floor, revealing the STUN GUN in Fowley’s hand. She kneels into frame by his body. Despite what we know of her treachery toward Mulder, we see some glimmer of real concern for him on her face.

First of all, this is an emotional confrontation between Mulder and Fowley that, in my humble opinion, needed to happen. After his unwavering integrity, after remaining loyal to her to his own hurt and risking his relationship with Scully even because he refused to turn on a friend, this needed to happen. I actually consider it twice as necessary for the sake of closure than any confrontation between Fowley and Scully.

Second of all, this brief scene reveals a lot about Fowley’s character and I’ve been itching to get inside that woman’s head a little. She knows exactly what’s going with Mulder which means she’s way ahead of him as far as what he’s learned about the aliens/colonists/whomever. That tells me she’s reasonably high up on the conspiracy chain. This is also our first glimmer that she really does care about Mulder. Prior to this she’s been a blank femme fatale, all calculating action with no feeling. Now we see that she’s conflicted and I find it interesting that she’s still afraid to tell Mulder the truth even though she knows he can read her mind.

Third of all, this clears up how Mulder went from lying weakly in bed to winding up a raving maniac in a padded cell. It also explains Fowley’s efforts to keep Scully from seeing him once he’s in that cell, because God forbid he somehow communicated his suspicions about Fowley to Scully. It would have been on.

Fowley and Scully don’t exactly end this episode on the best terms as it is, and I can at the very least say I’m grateful that Season 6 Scully gets to close us out with a bang. She’s already shown us so many different sides of herself this season… Weasel-Me-This Scully, Slap-A-Pimp Scully, Bimbo!Scully, and now Ain’t-No-Holla-Back-Girl Scully. So what triggers this latest incarnation?

Diana throws a couple of digs Scully’s way by implying that she’s in Mulder’s “In Group” while Scully’s in the “Out Group.” “Thank you for coming,” and, “He was asking for you last night” make it sound almost as though Diana’s family and Scully’s just a friend. Yet, self-possessed as ever, Scully is able to ignore all that until…

Fowley: [Mulder] said I was the only one who’d believe him.

One. Lie. Too. Far. Someone must not have told Fowley to watch “Folie a Deux” (5×19). If she had, she would have learned that, “Nobody else on this whole damn planet does or ever will” believe Mulder like Scully. Might he have called Diana because he trusts her too? Sure. But would he have told her she was the only one? Never. And Scully calls her on it immediately in a moment that’s probably the highlight of the episode for me. Long gone is the uncertain, insecure Scully of “The End” (5×20). Good riddance.

And the Verdict is…

I’ve kvetched enough. Now it’s time for me to admit that this episode is actually a lot better than I remember it being. Parts of it I can even say I enjoyed. The action is suspenseful and continuous, the performances are spot on, the images, the music… on a surface level, we’ve had much, much worse.

But as much as I do like watching Mulder lose his mind, and as much as I love that he still calls out for Scully even from the bowels of insanity, it’s the basic premise of “Biogenesis” that’s hard for me to get past.

Are these life-giving aliens the same ones that are about to take human life away? It seems to me that if the alien colonists have had this much power all along, not only would the Syndicate have been pretty useless to them, the whole plan to colonize us is superfluous. They planted us, they can harvest us just as easily. Throw new genetic material into our atmosphere or something, I don’t know. But there’s no longer any need for elaborate machinations; if they have the power of God they can simply use it.

This was why it was better when The X-Files only asked the great questions and didn’t attempt to answer them.



I have a question. How do we know when these spaceships first appeared on the earth? Is there some reason everyone is assuming that these multi-cultural writings pre-date the cultures and religions they document? And in that vein, how do they know that the aliens didn’t copy that information from humans rather than give it? I can’t believe Scully never seriously suggests it. Her brief, “How did the aliens get it?” is a throw away line.

Languages evolve. The Navajo of a hundred years ago isn’t the Navajo of today. So, if I’m to understand this correctly, not only thousands, but billions of years before the Navajo existed the aliens phonetically wrote in their language? Did the aliens give us all our respective languages too?

If our progenitors were alien, if they put us here, why are we trying to thwart their plans? Surely they know better than we do. And, after all, they’re only taking back what’s rightfully theirs.

Why does everyone keep throwing the rubbing in Mulder’s face? He tells Scully he thinks it’s the cause of his dissonance, she opens it up and breaks it out. Chuck Burke clearly states that he believes Mulder when he says the rubbing is bothering him, so what does he do? Put it up on the big screen.

Mulder is affected by the rubbing because he was once infected with the Black Oil virus back in “Tunguska” (4×9) where he was also treated by a vaccine for the virus developed by the Russians. In the movie, Scully is also infected with the Black Oil virus and is later given a vaccine that was stolen by the Syndicate from the Russians. Will someone please explain to me why only Mulder is affected? Had the second vaccine been tweaked? Was Scully’s version more effective?

Peanut Gallery:

A room full of monkeys in cages where a scientist is murdered? “The Erlenmeyer Flask” (1×23) much?

Chuck Burke! It’s been a while.

Use of recycled movie music – Yes, we know. Again, this is epic.

Skinner just called Scully “Dana.” Somewhere the Skinner/Scully Shippers rejoice.

Clever – We cut directly from Mulder having an attack to Scully looking like she might be having an attack in the hospital in New Mexico. Then that close-up shot of Scully as she hears… what is it? The alarm? Or is she experiencing dissonance too? Ah, it’s the alarm. But, clever. Very clever.

Come to think of it, it might actually have been more fun to watch Scully lose her mind a la “Wetwired” (3×23).

I think I may have upped this episode’s grade just for the discovery of Dr. Merkallen’s body in the trash compactor.

Ah, Scully. I love your new fashion sense but it seems to me a linen suit isn’t going to serve you well on the beach.

Best Quotes:

Mulder: I am just a hired gun for the F.B.I.

42 responses to “Biogenesis 6×22: Who had the audacity for such invention?

  1. Thank you!!! I always thought this episode was reminiscent of the Erlenmeyer Flask, specifically the scene with the monkeys. Every time I watch this episode I’m just waiting for Scully to crack a joke about monkey pee!

  2. Scully was about to mow Diana and Skinner down keeping secrets from her. You’ re both liars! It bothered me that Mulder had Diana in his apt and not scully. Why Chris Why? I do not see the purpose even Scully is asking who is that that answered the phone. When we all know she wanted to say ,WHO WAS THAT WOMAN OR WHO WAS THAT BITCH THAT ANSWERED YO PHONE!!! when here I am thinking we are gettin real close. I’m about to make my move or I’m about to let you make your move AFTER 6YEAR YEARS!!!!!!!!!!!!!!!! MULDER and you treate me like this. No it’s not ok.

  3. Salome you need to write Chris Carter and remind him about some of his episodes. I am concerned over X Files 3. I don’t want any slip ups or loose ends.

  4. I always thought this three-parter (Biogenesis, Sixth Ext. 1 and 2) was some of the best of the XFs. CC and Frank S. try to link religions, science, UFOs, prophesies and the Apocalypse all in one story. Plus you get to see Krycek, Fowley, CSM, Kritschgau, Samantha, Teena Mulder, Albert Hosteen, Chuck Burks and even Deep Throat. Maybe it was difficult to make all of this work in just a few episodes, but that is OK with me. It is the mystery and scope of the story that I enjoyed.

  5. “How do we know when these spaceships first appeared on the earth? Is there some reason everyone is assuming that these multi-cultural writings pre-date the cultures and religions they document?”
    This question is answered (at least in part) in Provenance (9×10). Scully tells Reyes that the ship was millions of years old based on the fossils found on it. Of course, it is possible that the ship is much older than that.

  6. Ah, I see that you’ve answered my question on why the text affects Mulder, but yeah, I’m still confused. And YES! Oh my goodness WHY didn’t they include that confrontation between Mulder and Fowley on the show? You mean they couldn’t have cut half of the monologue, that cursed scene which Fowley takes off her shirt, and several other unnecessary seconds? And the way Fowley undresses– so weird. It’s like she’s preparing for a business meeting, not seduction.

    • She is getting down to business! And the more I think about it, the more it doesn’t make sense that Diana was in such close proximity to him and he didn’t realize what she was even though his ability was rapidly progressing.

  7. Wait, I’m still confused about why the text affected Mulder. Help?

    • It’s because he had been exposed to the black oil in Tunguska. The oil lying dormant in his brain, being alien, is what’s really responding to the rubbing and causing Mulder’s brain to turn on it ways it shouldn’t. Does that make sense?

  8. Oh god. I second everything you said. Additionally, when this episode began, the first thing I could think was, “Oh god, another voice over monologue.” Then, thirty minutes later, “Oh god, another voice over monologue.”

    Also, the scene with Fowley/Scully:
    Fowley: “Thank you for coming, he was asking for you last night.”
    Scully: *inserts a side-eye look that clearly says, “This bitch…”*

    I die.

    This whole arc makes my stomach churn because it’s really the takeoff point for the next chapter of mythology, which makes me incredibly jaded. More on that later, though. XD

  9. I loved this review, I think because I was really looking forward to hearing what you had to say about the events of this episode, especially those surrounding She that shall not be named 😀

    I totally agree though, that scene should not have been cut. Overall, I loved season six, but this was a disappointing end to what was a great year of the show, adding new layers to the mythology and opening up a new can of worms are successfully resolving a lot in One Son was a strange decision and why was the CSM relegated to a one scene cameo?

    • What happened to the alien rebels??? What about the still continuing plans for colonization that, supposedly, could start and any moment on an accelerated timetable now that the deal with the Syndicate is off? Where in the J. Edgar Hoover is Agent Spender? That’s what I wanted/want to know.

      • Agreed ! Finally somebody who thinks some (HUGE) questions are left unanswered. Colonization is still at stakes, but hey, let’s act as if it never happened !

  10. Thank you so much for posting that deleted scene. I agree that it should have stayed in! They really didn’t do much with Fowley in the way of development, so this would have done a lot. Plus, Mulder freaking out on her and outing her as a liar? Priceless.

  11. Agent Venkman

    Wow, I had no idea about that scene that got cut out. It really would’ve made this episode that much better. Not that this episode was bad, I like it.

    The vaccine WMM gives to Mulder to cure Scully in FTF, certainly was superior to the vaccine the russians use on Mulder during Terma. Not only was Scully never affected by the rubbing, but she was also rejected by the force field in Requiem, while Mulder was not. Still, I’ve always wanted to believe that baby William was special, not because of any experimentation done to Scully, but because 2 people that were infected with the black oil had mated. Anyways…

    After this episode, with Scully finding the UFO, I was convinced that they were finally going to move forward with having Scully become a believer. A scientist first, but also a believer. It made total sense, considering season 7 was potentially the last one. Well, I was wrong once more.

    I wonder if Amor Fati had missing scenes, that episode is very disjointed. We never really know what happened to Fowley, except for Scully’s throwaway line. How could Scully enter that facility to rescue Mulder that easily? Why was it empty?

  12. Why wasn’t Krycek affected by the pieces from the ship? Seeing how he was infected with the black oil way back in Season 3, why didn’t it affect him as well? All I can think is that he got vaccinated with the same improved vaccine that WMM gave Mulder to give Scully in the movie and that Mulder’s was a weaker strain he received at the time.

    • I guess that’s cos the oil completely left him to go into the ship, so maybe there’s absolutely none left – with the others, we never saw the oil ejected.

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  20. The only groaner was the one you mention in the review..the huge spaceship just sitting in plain view on the beach…WTH? The only way that makes sense is if it just became visible at that moment and was hidden under the sand until then…but still…pretty lame. LOL.

    I like the direction they are going with the ancient alien story and the tension around Skinner and Fowley’s betrayals (though Skinner is in a tough spot, threatened with being turned into squid ink veins by Krycek)

  21. “And it certainly got a rise out of this audience. I remember rising to my feet in righteous indignation. (Chris Carter, don’t you make me come out there.)” First of all, may I say, absolutely hilarious succession of sentences. Second, I was exactly the same way! It was so completely unnecessary that I checked the online archives to check if I did indeed see what I saw. Sadly, it was.

    “Mulder is affected by the rubbing because he was once infected with the Black Oil virus back in “Tunguska” (4×9)” I actually didn’t really understand this part; could you explain this to me? Is it because the Black Oil connects him to alien life and the rubbing also has some trace of alien life in it?

  22. Nevermind, “The Sixth Extinction II: Amor Fati” just explained it to me.

  23. I recently found your site and enjoy your reviews very much. Regarding the question of why Diana was at Mulder’s apartment, I thought the scene of Krycek seeing Mulder collapsed in the stairwell was significant. Perhaps he was the one that called Diana, not our special agent.

    • Agreed. I always thought it was obvious that Krycek called Diana, not Mulder. That scene in the stairwell was too pointed.

      Also I feel so robbed we never get to see a confrontation between Mulder and Diana once he realized she was a traitor and Scully was right about her all along.Robbed, I tell you! THAT WOULD HAVE BEEN SO SATISFYING.

      Way more satisfying than watching outtakes of the completed kiss in the infamous hallway scene, so intense is my hatred of the Fowl One and her minxy antics.

  24. As a season finale I find this episode a little lacklustre. It lacks tension and energy which you’d expect from a season finale. Saying that though I do appreciate the themes it’s brings up relating to the cosmos, more so than the aliens put us here theory.

    I feel all the (unspoken) affection and love being built up between Mulder and Scully this season was just all undone with the scene with Diana Fowley seducing Mulder. Yeah thanks, Mulder.

    What was the point of bringing Albert Hosteen back when he has no lines? What a waste. I appreciate the connection to Anasazi, but little was done with it.

    I noticed that when Scully was peering into the smoke alarm camera, there was the second desk in the office, I’m assuming hers.

    What is krycek up to? Do I even care? He becomes so mysterious, that eventually you give up on trying to figure out his motivations. And again with the Skinner trust issues. We know he’s under kryceks control but as Scully said in SR819 “you’ve been an ally more times than I can count”. So making him now a figure of distrust seems do have ignored that episode, and gone backwards over familar ground.


    • I don’t know if this is mentioned in future posts by Salome, but I remember reading an interview with Nicholas Lea where he said he started to really dislike playing Krycek because it was impossible to work out his motivation: he was just there to do bad stuff

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  26. One of the many things that annoyed me about this episode was the scene with CSM sitting with military people; one of them spoke about how we are facing annihilation on a massive scale and “there seems to be nothing we can do to prevent it”. The last thing we hear is “it becomes a matter of managing the crisis”.

    So let’s get this straight. We saw and heard about a number of people being killed by rebels. Suddenly that means every single person who managed the conspiracy is gone and now a new group of people are discussing what to do? So everyone else died?

    Secondly, “managing the crisis” is explicit code for “let’s set up a new syndicate” but they never go anywhere with it.

    Thirdly, given that the rebels smash up the syndicate cos they want to mess with the plans and fight against “purity”, why is CSM still so certain that colonisation is happening?

    It’s such a shame that none of this stuff was ever touched on again. I wish there had been episodes about the chaos that would be caused by a global military, scientific and technological conspiracy being smashed up: M&S could’ve fought against attempts to use syndicate technology to harm people. No way did “the most private global enterprise” (Mulder’s words) melt away into nothing.

    I hate the story behind this series of episodes. I don’t mind them exploring ancient aliens, but as you hinted at Salome, if our progenitors were alien and our genesis was alien, it means *we were being bred from the start to become hosts for them when they returned*. Well-manicured man said “the virus walked the planet long before the dinosaurs”.

    It becomes too big to be investigated by the FBI, and thus our characters become too small. But at the same time, they turn Mulder into a superhero and, in the next few episodes, even show him in a crucifix-style pose on an operating table.

    Big sigh.

  27. Oh one other thing that truly annoyed me. The big reveal at the end.

    Scully is standing at the water, swishing it away from another artefact.

    But then we cut to an aerial shot and the continuity is… not good. There’s no water near her, there’s no artefact by her feet as there was before.

    I’m relaxed about continuity, but this was such a KEY scene, it really upset me that they couldn’t even match the CGI to the shot we saw 5 seconds earlier.

    It’s worse than the shooting in The End, where we see the Russian chess player pull the chess board completely off the table, and then 1 second later it’s back there: that’s just an editing choice about using the best shot; this was a conscious decision not to bother.

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